Ionic Interactions: Gas Phase Ion Chemistry and Cluster Photochemistry


James M. Farrar B. 1948. B.A.'70, Washington University; Ph.D. '74, University of Chicago (with Yuan-tseh Lee); National Science Foundation Fellow '70-73, Chicago; Postdoctoral Assoc. '74-'76, University of California - Berkeley (with Bruce H. Mahan); Asst. Prof. '76-'82, Assoc. Prof. '82-'86, Prof. '86-present, Department Chair, '97-'00, Rochester; Alfred P. Sloan Fellow '81-85; Visiting Fellow '87-'88, Joint Institute for Laboratory Astrophysics, University of Colorado; Fellow, American Physical Society, 1987-. Tel. (585)-275-5834





Email to : farrar@chem.rochester.edu



The Rochester Reaction Dynamics Group

The research of the Farrar group focuses on the reaction dynamics and photochemistry of ionic species. The objectives of these studies are to elucidate the reactivity of isolated gas phase species important in combustion, atmospheric and interstellar chemistry, and to understand the transition from the gas phase toward the condensed phases through size-dependent properties of mass-selected cluster ions. The research employs the techniques of molecular beams, mass spectrometry, laser spectroscopy, and ab initio quantum chemistry calculations.



Crossed Beam Studies of Ion-Molecule Collisions

Sketch by Professor Y. T. Lee

A long-standing interest of the group is in elucidating the dynamics of low energy ion-molecule reactions using crossed ion and molecular beams. The conventional approach to learning about collision dynamics is to measure reaction product distributions in velocity space coordinates in the center of mass frame of reference. A typical set of data for the OD- reaction products formed in collisions of O- + D2 at 1.20 eV is shown here. The loci of velocity space points corresponding to individual product vibrational states are circles with a common origin at the system center of mass velocity. When lab velocity distributions, which correspond to rays emanating from the lab coordinate origin, cut through these circles, the intensities observed provide information about product energy and angular distributions for OD- products in specific quantum states.

The next figure shows a complete representation of the center of mass distribution for this system, shown as a three-dimensional axonometric “mountain” plot, and as a color contour map. At 1.20 eV, the OD- reactions products are scattered forward strongly, and the most probable product state corresponds to v’ = 3.  Appropriate integrations of the full center of mass distributions allow us to extract product vibrational quantum state distributions.  The results of that analysis for six collision energies ranging from 0.25 to 1.20 eV are shown here. The O- + D2 system is surprisingly complicated in that the high vibrational excitation of the OD- product observed at high collision energies persists to low collision energies. Although the low energy angular distributions for individual vibrational states show behavior much more characteristic of a reaction proceeding through a transient intermediate, increasing collision energy results in a vibrational inversion, the extent of which increases with increasing collision energy. These results will provide incisive tests of ab initio potential energy surfaces and quantum dynamics.

 
Some recent studies the group has undertaken include:

Dynamics of proton transfer in the H3O+ + NH3 system
Dynamics of charge transfer and deuteron transfer in the D2O+ + C2H4 and NH3 systems
Dynamics of charge transfer and hydride transfer in the OD+ + C2H4 system
Photodissociation of mass-selected Mg+(NH3)n clusters
Vibrational state product resolution in OH- + D2 ® HOD + D-





Imaging Experiments

pix/imaging apparatus

The experiments we have performed to date involve point-by-point reconstruction of the center of mass flux distributions with one-dimensional scans in laboratory coordinates. The possibility of detecting all velocity space elements in a single time window promises to increase the capabilities of the crossed beam technique significantly. Our lab is currently developing an instrument (schematic shown at right) that will give us the capability to image velocity space distributions.  The diagram shows that the locus of points of reaction products with a constant center of mass speed is a sphere whose radius increases with time. Imaging the set of nested spheres describing the reaction products by projecting them on a plane allows all product velocity elements to be observed in a single time window. An example of the state-resolved nature of this detection scheme, taken from a study of ozone photodissociation from Paul Houston's lab, is shown here. The concentric rings correspond to different vibrational states of the product O2 molecules. The application of imaging methods based on multiplex (Fellgett) advantage will enhance product detection sensitivity by more than an order of magnitude.















Oxidation, electron transfer, and vibrational excitation
in the photodissociation dynamics of mass –selected clusters

TOF

The group has also directed its efforts toward photodissociation processes in mass–selected clusters. The group employs time of flight (TOF) mass spectrometry (see photo - click here for schematic) and laser photodissociation spectroscopy to probe the absorption spectra of clusters produced in a laser vaporization source. Absorption spectra, acquired by measuring photofragment intensities as a function of photolysis wavelength at a selected mass, provide information on the electronic properties of the clusters. Our efforts have been devoted to understanding processes of solvent evaporation and reaction in clusters of singly-charged alkaline earth cations solvated by the polar solvent molecules NH3, H2O, CH3OH, CH3NH2, and their isotopomers.

A comparison of the spectra for strontium cations solvated by NH3, H2O, and CH3OH and the analogous magnesium systems, shows a similar pattern of behavior. Large red shifts occur with increasing numbers of first-shell solvent molecules, but the shifts appear to saturate when the first shell closes. A picture appears to be emerging suggesting that such spectra provide evidence for the formation of contact and solvent-separated ion pair species that serve as precursors to solvated electron formation.

Our current work is focused on studying clusters that contain more than one Rydberg center. Our recent work has shown that clusters formed from Sr+ solvated with at least 12 NH3 molecules acquire excess hydrogen atoms. In deuterium-labelled clusters with the stoichiometry Sr+(ND3)nDx, we have obtained both chemical and spectroscopic evidence that the excess D atoms can bind in two chemically distinct sites. Spectroscopic evidence indicates that such clusters contain a metal-D core that accounts for a single excess deuterium atom. The remaining D atoms are surface bound as solvated ammonium radicals having the stoichiometry ND4(ND3)n.
   

Friends and Family

We enjoy the opportunity to maintain our family ties. Over the years, we have been privileged to work with many talented students, postdocs, and collaborators at other institutions. We maintain an e-mail list of former group members, but we need your assistance in keeping that list current. Please email Jim Farrar if you see that we do not have a current address for you. The most recent graduates from the group include Drs. Susan Troutman Lee, James I. Lee, David C. Sperry, and Elizabeth Richards O'Grady. Sue is a staff scientist at ThermoFinnigan, Jim is a design engineer at Stanford Research Systems, David is a research chemist at Bausch & Lomb, and Elizabeth is a Field Service Engineer at Agilent.

Our group has had a long-standing relationship with members of the molecular beam group at the University of Perugia in Italy. This project has its origins in the crossed beam work of Professor Franco Vecchiocattivi (pictured at left with his wife, Loretta) and his co-worker Dr. Bruno Brunetti of Perugia.  Over the past 12 years, our groups have exchanged a number of useful visits.  Click here to see the University of Perugia's molecular beams homepage.

We also keep a "group photo album", updated February 8, 2007, which contains snapshots of former group members, collaborators, and other friends. Please check it out!


Representative publications:


Li Liu, Yue Li, and James M. Farrar, "Singlet and Triplet State Dynamics of Charge and Hydride Transfer Reactions of OD+ (X 3S -)with Propyne" Int. J. Mass Spectrom. 2008, Zdenek Herman Honor Issue, accepted. Click here for a preprint.

Li Liu, Yue Li, Xiaohui Cai, Elizabeth S. Richards and James M. Farrar, "Low Energy Crossed Beam Studies of OD+ and D2O+ with C2H4: Covalent and Electrostatic Complexes", Physica Scripta, 2007, 76, C48-C55.

Li Liu, Elizabeth S. Richards, and James M. Farrar, "Hydride transfer reaction dynamics of OD+ + C3H6", J. Chem. Phys, 2007, 127, 244315.

Li Liu, Courtney Martin, and James M. Farrar, "Reaction dynamics of OH+ (X 3S -)+ C2H2 studied with crossed beams and density functional theory calculations", J. Chem. Phys., 2006, 125, 133117.

Li Liu, Yue Li, and James M. Farrar, "Dynamics study of the reaction OH- + C2H2 ® C2H- + H2O with crossed beams and DFT calculations", J. Chem. Phys., 2006, 124, 124317.

Yue Li, Li Liu, and James M. Farrar, “A quantum state-resolved study of the four atom reaction: OH- (X1S +) + D2 (X1S g+, v = 0) ® HOD (X1A¢, v') + D- (1S)”, J. Phys. Chem. A, 2005, 109, 6392-6396.

Li Liu, Yue Li, and James M. Farrar, “Reaction dynamics study of O- + C2H2 with crossed beams and density-functional theory calculations”, J. Chem. Phys., 2005, 123, 094304.

James M.Farrar, "Ion-Molecule Reactions", in Springer Handbook of Atomic, Molecular, and Optical Physics, edited by G. W. Drake (Springer-Verlag, New York, 2005), pp. 993-1003.

Xiaohui Cai, Yue Li, Elizabeth Richards O'Grady,and James M. Farrar,“Experimental and theoretical studies of charge transfer and hydride transfer in the reactions of OD+ + C2H4 Int. J. Mass Spectrom. 2005, 241, 271-282.

James I. Lee, David C. Sperry, and James M. Farrar,“Spectroscopy and reactivity of size-selected Mg+- ammonia clusters”, J. Chem. Phys. 2004, 121, 8375-8384.

Yue Li and James M. Farrar,“Reaction dynamics of H2O+ (D2O+) + NH3 studied with crossed molecular beams and DFT calculations”, J. Phys. Chem. A 2004, 108, 9876-9886.

Here is a link to the first publication of Andy Farrar (son of JMF): Andrew M. Farrar, Artur K. Kieres, Kathryn A. Hausknecht, Harriet de Wit, and Jerry B. Richards, "Effects of reinforcer magnitude on an animal model of impulsive behavior", Behavioral Processes 2003 64, 261-271.

Li Liu, Xiaohui Cai, Yue Li, Elizabeth Richards O’Grady, and James M. Farrar,“Experimental and theoretical studies of deuterium ion transfer and charge transfer between D2O+ and C2H4”, J. Chem. Phys. 2004, 121, 3495-3506.

Yue Li and James M. Farrar, “Proton transfer dynamics of the reaction H3O+ (NH3, H2O)  NH4+ “, J. Chem. Phys. 2004, 120, 199-205.

James M. Farrar, “Crossed Beam Methods for Ion Collisions”, in Encyclopedia of Mass Spectrometry, Volume 1, edited by Peter B. Armentrout (Elsevier, Armsterdam, 2003), pp. 158-174. 

James M. Farrar, “Size-dependent reactivity in open shell metal-ion polar solvent clusters: spectroscopic probes of electronic-vibration coupling, oxidation and ionization”, Int. Rev. Phys. Chem. 2003, 22, 593-640.

James M. Farrar, “Steric and Solvent Effects in Ionic Reactions”, Science 2002, 295, 2222-2223.





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Updated August 11, 2008

jmf